Selected publications

1. Braga, L., Spor, A., Kot, W., Breuil, M. C., Hansen, L. H., Setubal, J. C., & Philippot, L. (2020). Impact of phages on soil bacterial communities and nitrogen availability under different assembly scenarios. Microbiome, 8(1), 52. https://doi.org/10.1186/s40168-020-00822-z

2. ​Moreau D., Bardgett R.D., Finlay R.D., Jones D.L., . 2019. A plant perspective on nitrogen cycling in the rhizosphere. Functional Ecology. Functional Ecology 33:540–552.Moreau D., Bardgett R.D., Finlay R.D., Jones D.L., . 2019. A plant perspective on nitrogen cycling in the rhizosphere. Functional Ecology. Functional Ecology 33:540–552.

3. Calderon K., Spor A., Breuil M.C. , Bru D., Bizouard F., Violle C., Barnard R., Philippot L. 2017. Effectiveness of ecological rescue for altered soil microbial communities and functions. 11, 272–283

4. Jones C.M., Spor A., Brennan F.P, Breuil M.C., Bru D., Lemanceau P ., Griffiths B., Hallin S., Philippot L. 2014. Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4: 801-805

5. Gaba S., Bretagnolle F., Rigaud T., Philippot L. 2014. Managing biotic interactions for ecological intensification of agroecosystem. Frontiers in Ecology and Evolution. 2: Article 29

6. Philippot L., Raaijmakers JM., Lemanceau P, van der Putten WH. 2013. Going back to the roots: the microbial ecology of the rhizosphere. Nature Reviews Microbiology. 11:789-799

7. Jones C.M., Graf D, Bru D., Philippot L., Hallin S. 2013. The unaccounted yet abundant nitrous oxide reducing microbial community - a potential nitrous oxide sink. The ISME J. J 7: 417-426

8. Philippot L., Spor A., Henault C., Bru D., Bizouard F., Jones C.M.  Sarr A. Maron P-A. 2013. ISME J. Loss in microbial diversity affects nitrogen-cycling in soil. 7: 1609–1619

9. Griffiths B.S., Philippot L. 2013. Insights into the resilience and resistence of soil microbial communities. FEMS Microb Rev. 37:  112-29

10. Jones C.M., Graf D, Bru D., Philippot L., Hallin S. 2013. The unaccounted yet abundant nitrous oxide reducing microbial community - a potential nitrous oxide sink. The ISME J. J 7: 417-426

11. Philippot L., Ritz K., Pandard P., Hallin S., Martin-Laurent F. 2013. Standardisation of methods in soil microbiology: progress and challenges. FEMS Microb Ecol. 82: 1-13

12. Philippot L., Hallin S. 2011. Towards food, feed and energy crops mitigating climate change. Trends in Plant Science. 16:476-480..

13.  Wessén E., Söderström M., Stenberg M., Bru D., Hellman M., Thomson F., Klemedtson L., Philippot L., Hallin S. 2011. Spatial distribution of ammonia oxidizing bacteria and archaea across a 44-hectare farm related to ecosystem functioning. ISME J. 5: 1213-1225

14. Bru D, Ramette A, Saby Npa, Dequiedt S, Ranjard L, Jolivet C, Arrouays D, Philippot L. 2011. Determinants of the distribution of nitrogen-cycling microbial communities at the landscape-scale. The ISME J. 5: 532-542

15.  Philippot L., Tscherko D., Bru D., Kandeler E. 2011. Distribution of high bacterial taxa across the chronosequence of two alpine glacier forelands. Microb. Ecol. 61:303-312

16.  Philippot L., Andert J., Jones C.M., Bru B., Hallin S. 2011. Importance of denitrifiers lacking the genes encoding the nitrous oxide reductase for N2O emissions from soil. Global Change Biology. 17:1497-1504

17. Philippot L., Andersson S.G.E., Battin T.J., Prosser J.I., Schimel J.P., Whitman W.B., Hallin S. 2010. The ecological coherence of high bacterial taxonomic ranks. Nature Rev. Microbiol. 8: 524-529

18. Philippot L, Čuhel J. Saby N.P.A., Cheneby A., Chroňáková, Bru D., Arrouays D., Martin-Laurent F., Šimek M. 2009. Mapping field-scale spatial distribution patterns of size and activity of the denitrifier community. Environ. Microbiol. 11:1518-1526.

19. Philippot L, Bru D., Saby Npa, Čuhel J, Arrouays D, Šimek M, Hallin S. 2009. Spatial patterns of bacterial taxa in nature reflect the 16S rRNA bacterial tree branching patterns. 11: 3096-3104.

20.  Hallin S., Jones C., Schloter M., Philippot L. 2009. Relationship between N-cycling bacterial communities and ecosystem functioning in a 50 years old fertilization experiment. ISME J. 3: 597-605

21.  Vogel T.M., Simonet P., Jansson J.K., Hirsch P.R., Tiedje J.M., Van Elsas J.D., Bailey M.J., Nalin R., Philippot L. 2009. TerraGenome: An international consortium for the complete sequencing of a soil metagenome. Nature Reviews Microbiology. 7:252-252.

22. Philippot L., Hallin S. 2005. Denitrifying bacteria: A model of functional community to find the missing link between diversity and activity. Current Opinion Microbiol. 8:1-6

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